Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AC034105.1-201ENST00000563488 319 ntBASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AC040169.1-201ENST00000565382 521 ntBASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 NORAD-201ENST00000565493 5339 ntBASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 DBET-201ENST00000630918 3363 ntBASIC10.73□□□□□ -0.69
LINC00474Q9P2X8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AL022342.1-201ENST00000400363 863 ntBASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 KRT18P3-201ENST00000451602 1288 ntBASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00474Q9P2X8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms