Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 RNU1-129P-201ENST00000384064 167 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 CXCL1P1-201ENST00000502804 216 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 KRT18P56-201ENST00000507275 550 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AL031432.2-201ENST00000566714 459 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AL928711.1-201ENST00000570165 459 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 U1.21-201ENST00000580816 167 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AC004790.2-201ENST00000623588 572 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AC092850.2-201ENST00000623821 2697 ntBASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD1Q9NXG2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 OR7E47P-204ENST00000575924 449 ntBASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 ACTL9-202ENST00000612068 1252 ntBASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AC063926.3-201ENST00000624734 5658 ntBASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AP002414.3-201ENST00000589352 1468 ntBASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD1Q9NXG2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 AC005622.1-201ENST00000636801 1703 ntBASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 FAAHP1-202ENST00000446499 1238 ntBASIC15.38■□□□□ 0.05
THUMPD1Q9NXG2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms