Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 KRT17P8-201ENST00000540749 863 ntBASIC18.11■□□□□ 0.49
VTA1Q9NP79 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 WFDC1-204ENST00000613603 549 ntBASIC18.11■□□□□ 0.49
VTA1Q9NP79 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VTA1Q9NP79 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTA1Q9NP79 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 AC112492.5-201ENST00000421897 457 ntBASIC18.1■□□□□ 0.49
VTA1Q9NP79 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 AC104596.2-201ENST00000512793 793 ntBASIC18.1■□□□□ 0.49
VTA1Q9NP79 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 RAB43P1-201ENST00000561790 589 ntBASIC18.1■□□□□ 0.49
VTA1Q9NP79 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.1■□□□□ 0.49
VTA1Q9NP79 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTA1Q9NP79 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 KRT8P37-201ENST00000451609 1420 ntBASIC18.09■□□□□ 0.49
VTA1Q9NP79 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 AC007389.4-201ENST00000454674 793 ntBASIC18.09■□□□□ 0.49
VTA1Q9NP79 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 MIR8072-201ENST00000614241 80 ntBASIC18.09■□□□□ 0.49
VTA1Q9NP79 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTA1Q9NP79 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VTA1Q9NP79 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTA1Q9NP79 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
VTA1Q9NP79 CLK3P2-201ENST00000427566 1453 ntBASIC18.08■□□□□ 0.49
VTA1Q9NP79 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
VTA1Q9NP79 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTA1Q9NP79 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTA1Q9NP79 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 AZGP1P1-201ENST00000411909 902 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms