Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 HLA-V-204ENST00000476601 1289 ntBASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 IGHV3-72-202ENST00000621503 303 ntBASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 TERF1P3-201ENST00000505638 1227 ntBASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 AL035456.1-201ENST00000456064 1369 ntBASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KIAA1549Q9HCM3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 MEIS3P1-201ENST00000495167 958 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC009118.2-201ENST00000613275 655 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AL109936.8-201ENST00000641772 604 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC087499.5-201ENST00000452760 1342 ntBASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
KIAA1549Q9HCM3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms