Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AC010336.2-201ENST00000564226 506 ntBASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AC140878.1-201ENST00000565277 250 ntBASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 AC005915.1-201ENST00000624912 2018 ntBASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SCAF1Q9H7N4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AL392088.1-201ENST00000428364 670 ntBASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ADH5P3-201ENST00000433842 1137 ntBASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 KRT8P48-201ENST00000515599 1220 ntBASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 AL805961.1-202ENST00000641562 540 ntBASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC24.52■■□□□ 1.52
SCAF1Q9H7N4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 AC240504.1-201ENST00000395709 845 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 PGF-202ENST00000405431 666 ntTSL 5 BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 AL592309.1-201ENST00000443127 649 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 SPDYE11-202ENST00000450699 704 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 SPDYE9P-201ENST00000570642 692 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 AC017083.2-201ENST00000608069 979 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 SPDYE10P-202ENST00000612005 668 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 SPDYE8P-202ENST00000612377 668 ntBASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCAF1Q9H7N4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 CU639417.3-201ENST00000624240 1404 ntBASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCAF1Q9H7N4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms