Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ELK2BP-201ENST00000415014 1224 ntBASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 KRT18P2-201ENST00000447938 1258 ntBASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AC004706.3-202ENST00000621574 984 ntBASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AL592424.1-201ENST00000563624 1536 ntBASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AC006504.4-201ENST00000592118 1568 ntBASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 AL805961.1-202ENST00000641562 540 ntBASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXP3Q9BZS1 PI4KAP1-204ENST00000612579 1703 ntBASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 LINC00554-201ENST00000564841 3011 ntBASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 PTCHD3P3-201ENST00000403073 906 ntBASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.87■□□□□ 0.29
FOXP3Q9BZS1 SLC25A6P2-201ENST00000497974 877 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms