Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AC131009.4-201ENST00000624048 1740 ntBASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 PCGF3-213ENST00000620529 1899 ntBASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 POU5F1P6-201ENST00000466990 990 ntBASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 NPAP1P7-201ENST00000613027 823 ntBASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMSS1Q9BQ75 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC010491.1-201ENST00000563101 2797 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC087163.2-201ENST00000457299 853 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC106795.1-205ENST00000512851 1056 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC091167.2-201ENST00000579581 588 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC092119.3-201ENST00000612618 583 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AF228730.7-201ENST00000641842 219 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 LINC01144-201ENST00000626198 1710 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 AL365209.1-201ENST00000624418 6473 ntBASIC14.03□□□□□ -0.16
CMSS1Q9BQ75 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms