Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 RHOQP2-201ENST00000449922 579 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CTBP2P8-201ENST00000422584 1330 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 FAM86FP-201ENST00000338711 969 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC021723.1-201ENST00000486306 515 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SLC25A15P1-201ENST00000456738 342 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC063952.3-201ENST00000467756 308 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 KRT18P43-201ENST00000469825 1281 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 SLC25A15P3-201ENST00000505530 290 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ABHD17AP9-201ENST00000561925 548 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AL139327.4-201ENST00000612362 153 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC006986.1-201ENST00000612764 241 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AC138466.5-201ENST00000624002 808 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 AL451007.2-201ENST00000632004 563 ntBASIC4.82□□□□□ -1.64
HMCN1Q96RW7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMCN1Q96RW7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms