Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
SHC3Q92529 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 ELL2P1-201ENST00000413990 1906 ntBASIC17.37■□□□□ 0.37
SHC3Q92529 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SHC3Q92529 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SHC3Q92529 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.36■□□□□ 0.37
SHC3Q92529 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 FAM220BP-201ENST00000377689 816 ntBASIC17.36■□□□□ 0.37
SHC3Q92529 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.36■□□□□ 0.37
SHC3Q92529 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 YBX1P5-201ENST00000509441 847 ntBASIC17.36■□□□□ 0.37
SHC3Q92529 KRT8P23-201ENST00000560090 1207 ntBASIC17.36■□□□□ 0.37
SHC3Q92529 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.36■□□□□ 0.37
SHC3Q92529 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SHC3Q92529 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.36■□□□□ 0.37
SHC3Q92529 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SHC3Q92529 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 CICP6-201ENST00000457191 2729 ntBASIC17.36■□□□□ 0.37
SHC3Q92529 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SHC3Q92529 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC3Q92529 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC3Q92529 PAUPAR-201ENST00000630360 2965 ntBASIC17.36■□□□□ 0.37
SHC3Q92529 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 TIMM8BP1-201ENST00000452384 211 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.35■□□□□ 0.37
SHC3Q92529 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.35■□□□□ 0.37
SHC3Q92529 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 AC132872.4-202ENST00000622924 2756 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC3Q92529 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC3Q92529 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SHC3Q92529 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC3Q92529 AC105917.1-201ENST00000506637 2539 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms