Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AC006557.2-201ENST00000592985 1240 ntBASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AF228730.7-201ENST00000641842 219 ntBASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 POU5F1P6-201ENST00000466990 990 ntBASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 RPL13AP23-201ENST00000480739 586 ntBASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 AC092910.1-201ENST00000482027 1129 ntBASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 AL589182.2-201ENST00000619332 1049 ntBASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RAB40AQ8WXH6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC012640.2-201ENST00000561606 901 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms