Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFWD2Q8NHY2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFWD2Q8NHY2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 RCN1P2-201ENST00000398357 915 ntBASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 TOB2P1-201ENST00000469761 992 ntBASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFWD2Q8NHY2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 AC092919.2-201ENST00000623631 1645 ntBASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 AP002383.4-201ENST00000442518 975 ntBASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD2Q8NHY2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 MINOS1P3-201ENST00000457048 203 ntBASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 AP000867.3-201ENST00000524675 377 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms