Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 MIR149-201ENST00000384879 89 ntBASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 GPX1P1-201ENST00000388829 606 ntBASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 AC123595.1-201ENST00000440769 1046 ntBASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 HES2-206ENST00000489730 730 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 LINC00304-203ENST00000565008 1864 ntBASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 PCDHA9-201ENST00000378122 6900 ntBASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC8.95□□□□□ -0.98
SPTSSBQ8NFR3 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms