Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 AC124283.3-201ENST00000570869 594 ntBASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP43Q8NDM7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 CU634019.7-201ENST00000624153 1185 ntBASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 FP236241.2-201ENST00000624906 1185 ntBASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 KRT8P37-201ENST00000451609 1420 ntBASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 FTH1P14-201ENST00000482930 551 ntBASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC25.04■■□□□ 1.6
CFAP43Q8NDM7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP43Q8NDM7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 TDH-203ENST00000531764 1110 ntBASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms