Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PROM2Q8N271 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM2Q8N271 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PROM2Q8N271 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.52■□□□□ 0.88
PROM2Q8N271 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.52■□□□□ 0.88
PROM2Q8N271 VDAC1P7-201ENST00000462417 847 ntBASIC20.52■□□□□ 0.88
PROM2Q8N271 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.52■□□□□ 0.88
PROM2Q8N271 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PROM2Q8N271 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PROM2Q8N271 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.52■□□□□ 0.88
PROM2Q8N271 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.52■□□□□ 0.88
PROM2Q8N271 MIR4321-201ENST00000592276 80 ntBASIC20.52■□□□□ 0.88
PROM2Q8N271 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM2Q8N271 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.52■□□□□ 0.88
PROM2Q8N271 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.52■□□□□ 0.88
PROM2Q8N271 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM2Q8N271 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PROM2Q8N271 AC018735.1-201ENST00000437208 1502 ntBASIC20.52■□□□□ 0.87
PROM2Q8N271 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PROM2Q8N271 KRT8P37-201ENST00000451609 1420 ntBASIC20.52■□□□□ 0.87
PROM2Q8N271 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PROM2Q8N271 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PROM2Q8N271 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.52■□□□□ 0.87
PROM2Q8N271 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.51■□□□□ 0.87
PROM2Q8N271 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.51■□□□□ 0.87
PROM2Q8N271 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PROM2Q8N271 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PROM2Q8N271 AL355994.1-201ENST00000424379 260 ntBASIC20.51■□□□□ 0.87
PROM2Q8N271 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.51■□□□□ 0.87
PROM2Q8N271 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC20.51■□□□□ 0.87
PROM2Q8N271 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PROM2Q8N271 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 MIR4741-201ENST00000579822 90 ntBASIC20.51■□□□□ 0.87
PROM2Q8N271 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PROM2Q8N271 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 AL390961.4-201ENST00000623958 2535 ntBASIC20.51■□□□□ 0.87
PROM2Q8N271 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.51■□□□□ 0.87
PROM2Q8N271 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
PROM2Q8N271 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM2Q8N271 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.5■□□□□ 0.87
PROM2Q8N271 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 IMP3P2-201ENST00000489760 475 ntBASIC20.5■□□□□ 0.87
PROM2Q8N271 RPSAP36-202ENST00000494591 1261 ntBASIC20.5■□□□□ 0.87
PROM2Q8N271 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.5■□□□□ 0.87
PROM2Q8N271 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.5■□□□□ 0.87
PROM2Q8N271 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.5■□□□□ 0.87
PROM2Q8N271 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.5■□□□□ 0.87
PROM2Q8N271 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.5■□□□□ 0.87
PROM2Q8N271 AC108673.2-201ENST00000608909 565 ntBASIC20.5■□□□□ 0.87
PROM2Q8N271 AC097724.1-201ENST00000609581 426 ntBASIC20.5■□□□□ 0.87
PROM2Q8N271 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PROM2Q8N271 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.5■□□□□ 0.87
PROM2Q8N271 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PROM2Q8N271 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.5■□□□□ 0.87
PROM2Q8N271 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PROM2Q8N271 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PROM2Q8N271 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.49■□□□□ 0.87
PROM2Q8N271 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.49■□□□□ 0.87
PROM2Q8N271 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.49■□□□□ 0.87
PROM2Q8N271 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms