Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.09■□□□□ 0.17
SYVN1Q86TM6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYVN1Q86TM6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYVN1Q86TM6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYVN1Q86TM6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
SYVN1Q86TM6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.08■□□□□ 0.17
SYVN1Q86TM6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 AC105917.1-201ENST00000506637 2539 ntBASIC16.08■□□□□ 0.17
SYVN1Q86TM6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.08■□□□□ 0.17
SYVN1Q86TM6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYVN1Q86TM6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 AL513480.1-201ENST00000451731 511 ntBASIC16.07■□□□□ 0.16
SYVN1Q86TM6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYVN1Q86TM6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYVN1Q86TM6 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.06■□□□□ 0.16
SYVN1Q86TM6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms