Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.88■□□□□ 0.61
PDZRN4Q6ZMN7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC098831.1-202ENST00000438821 336 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC092910.1-201ENST00000482027 1129 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC126755.1-201ENST00000525846 6405 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC105339.3-201ENST00000560043 636 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 GPALPP1-207ENST00000611650 899 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC006538.3-201ENST00000612495 578 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC023157.3-201ENST00000619086 2088 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 AC026748.1-201ENST00000624349 3251 ntBASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PDZRN4Q6ZMN7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 SPDYE21P-201ENST00000413323 827 ntBASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AC073592.5-201ENST00000624854 528 ntBASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AL359258.3-201ENST00000622910 2331 ntBASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 AC023908.3-201ENST00000564211 3047 ntBASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.86■□□□□ 0.61
PDZRN4Q6ZMN7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 AC067930.6-201ENST00000623257 4947 ntBASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 AC104109.2-201ENST00000602919 1418 ntBASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 PRYP5-201ENST00000451909 266 ntBASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 POLD2P1-201ENST00000511220 997 ntBASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDZRN4Q6ZMN7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms