Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 KRT8P39-201ENST00000396270 1433 ntBASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 PAWRP1-201ENST00000451083 565 ntBASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 NKAPP1-205ENST00000585790 367 ntBASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 AC097376.2-205ENST00000610159 5334 ntBASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SH2D4BQ5SQS7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 KRT16P4-201ENST00000453883 522 ntBASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH2D4BQ5SQS7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.27■□□□□ 0.19
SH2D4BQ5SQS7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH2D4BQ5SQS7 AC126177.1-201ENST00000547829 2218 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms