Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 INTS4P1-201ENST00000438455 1935 ntBASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AP000867.4-201ENST00000641616 219 ntBASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 AC106881.1-201ENST00000605849 3329 ntBASIC13.61□□□□□ -0.23
ANKRD55Q3KP44 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 AC023908.3-201ENST00000564211 3047 ntBASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.6□□□□□ -0.23
ANKRD55Q3KP44 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms