Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RFX4Q33E94 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 AL161772.1-201ENST00000610494 4412 ntBASIC15.25■□□□□ 0.03
RFX4Q33E94 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFX4Q33E94 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFX4Q33E94 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 BX005266.1-201ENST00000473402 457 ntBASIC15.24■□□□□ 0.03
RFX4Q33E94 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 AP001269.4-201ENST00000609611 512 ntBASIC15.24■□□□□ 0.03
RFX4Q33E94 AC092119.3-201ENST00000612618 583 ntBASIC15.24■□□□□ 0.03
RFX4Q33E94 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RFX4Q33E94 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 AC020658.6-201ENST00000623564 1870 ntBASIC15.24■□□□□ 0.03
RFX4Q33E94 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 NCF1C-201ENST00000438382 1427 ntBASIC15.24■□□□□ 0.03
RFX4Q33E94 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX4Q33E94 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX4Q33E94 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX4Q33E94 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX4Q33E94 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX4Q33E94 MPDU1-223ENST00000582151 728 ntBASIC15.23■□□□□ 0.03
RFX4Q33E94 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 AL022326.1-202ENST00000641533 845 ntBASIC15.23■□□□□ 0.03
RFX4Q33E94 AC092919.2-201ENST00000623631 1645 ntBASIC15.23■□□□□ 0.03
RFX4Q33E94 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms