Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.77■□□□□ 0.11
PCDH1Q08174 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH1Q08174 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCDH1Q08174 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 AL022342.1-201ENST00000400363 863 ntBASIC15.76■□□□□ 0.11
PCDH1Q08174 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH1Q08174 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDH1Q08174 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 PGAM5P1-201ENST00000518923 814 ntBASIC15.76■□□□□ 0.11
PCDH1Q08174 RARRES2P8-201ENST00000566335 367 ntBASIC15.76■□□□□ 0.11
PCDH1Q08174 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 AC024909.3-201ENST00000611513 2257 ntBASIC15.76■□□□□ 0.11
PCDH1Q08174 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDH1Q08174 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH1Q08174 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH1Q08174 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH1Q08174 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH1Q08174 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDH1Q08174 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH1Q08174 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 AC112504.1-201ENST00000623415 1841 ntBASIC15.75■□□□□ 0.11
PCDH1Q08174 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH1Q08174 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH1Q08174 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH1Q08174 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH1Q08174 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH1Q08174 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 MIR574-201ENST00000385209 96 ntBASIC15.75■□□□□ 0.11
PCDH1Q08174 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 PRYP6-201ENST00000514804 343 ntBASIC15.75■□□□□ 0.11
PCDH1Q08174 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH1Q08174 AC040169.1-201ENST00000565382 521 ntBASIC15.75■□□□□ 0.11
PCDH1Q08174 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH1Q08174 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH1Q08174 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH1Q08174 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDH1Q08174 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH1Q08174 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
PCDH1Q08174 CDC14C-201ENST00000428251 1719 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDH1Q08174 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDH1Q08174 AC004832.2-201ENST00000426397 482 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 ADH5P3-201ENST00000433842 1137 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH1Q08174 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDH1Q08174 KRT18P58-201ENST00000527480 1120 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 FAM86C2P-203ENST00000528684 1004 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH1Q08174 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH1Q08174 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDH1Q08174 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDH1Q08174 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 MIR4321-201ENST00000592276 80 ntBASIC15.74■□□□□ 0.11
PCDH1Q08174 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDH1Q08174 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDH1Q08174 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH1Q08174 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH1Q08174 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH1Q08174 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH1Q08174 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms