Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
IRX3P78415 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
IRX3P78415 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19■□□□□ 0.63
IRX3P78415 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19■□□□□ 0.63
IRX3P78415 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
IRX3P78415 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.99■□□□□ 0.63
IRX3P78415 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
IRX3P78415 AC087499.6-201ENST00000411576 835 ntBASIC18.99■□□□□ 0.63
IRX3P78415 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.99■□□□□ 0.63
IRX3P78415 ZNF890P-202ENST00000530367 1156 ntBASIC18.99■□□□□ 0.63
IRX3P78415 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.99■□□□□ 0.63
IRX3P78415 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
IRX3P78415 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.99■□□□□ 0.63
IRX3P78415 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
IRX3P78415 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX3P78415 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 SNX33P1-201ENST00000592116 1762 ntBASIC18.98■□□□□ 0.63
IRX3P78415 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 AC092068.3-201ENST00000587894 2016 ntBASIC18.98■□□□□ 0.63
IRX3P78415 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
IRX3P78415 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.98■□□□□ 0.63
IRX3P78415 GPR53P-205ENST00000457298 1084 ntBASIC18.98■□□□□ 0.63
IRX3P78415 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.98■□□□□ 0.63
IRX3P78415 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.98■□□□□ 0.63
IRX3P78415 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
IRX3P78415 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
IRX3P78415 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX3P78415 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX3P78415 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 AL391825.1-201ENST00000457671 1364 ntBASIC18.97■□□□□ 0.63
IRX3P78415 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.97■□□□□ 0.63
IRX3P78415 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
IRX3P78415 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 SPDYE19P-201ENST00000338590 713 ntBASIC18.97■□□□□ 0.63
IRX3P78415 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.97■□□□□ 0.63
IRX3P78415 AP006294.1-201ENST00000415407 339 ntBASIC18.97■□□□□ 0.63
IRX3P78415 ARSEP1-201ENST00000420443 635 ntBASIC18.97■□□□□ 0.63
IRX3P78415 U91328.1-201ENST00000437528 223 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms