Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC090142.2-201ENST00000483263 416 ntBASIC17.17■□□□□ 0.34
USP46P62068 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.17■□□□□ 0.34
USP46P62068 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.17■□□□□ 0.34
USP46P62068 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.17■□□□□ 0.34
USP46P62068 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 MIR3197-201ENST00000582241 73 ntBASIC17.17■□□□□ 0.34
USP46P62068 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 SPDYE12P-201ENST00000618416 771 ntBASIC17.17■□□□□ 0.34
USP46P62068 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
USP46P62068 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 BASP1P1-201ENST00000430708 665 ntBASIC17.16■□□□□ 0.34
USP46P62068 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.16■□□□□ 0.34
USP46P62068 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 AC005052.1-201ENST00000625181 2492 ntBASIC17.16■□□□□ 0.34
USP46P62068 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.16■□□□□ 0.34
USP46P62068 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.16■□□□□ 0.34
USP46P62068 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP46P62068 AC005622.1-201ENST00000636801 1703 ntBASIC17.16■□□□□ 0.34
USP46P62068 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.15■□□□□ 0.34
USP46P62068 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP46P62068 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.15■□□□□ 0.34
USP46P62068 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.15■□□□□ 0.34
USP46P62068 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.15■□□□□ 0.34
USP46P62068 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.15■□□□□ 0.34
USP46P62068 INGX-202ENST00000489074 768 ntBASIC17.15■□□□□ 0.34
USP46P62068 RNA5SP421-201ENST00000516864 134 ntBASIC17.15■□□□□ 0.34
USP46P62068 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.15■□□□□ 0.34
USP46P62068 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.15■□□□□ 0.34
USP46P62068 AL138828.2-201ENST00000615812 383 ntBASIC17.15■□□□□ 0.34
USP46P62068 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP46P62068 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP46P62068 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP46P62068 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.15■□□□□ 0.34
USP46P62068 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP46P62068 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP46P62068 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms