Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN2P57739 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN2P57739 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.06■□□□□ 0.16
CLDN2P57739 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN2P57739 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN2P57739 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CLDN2P57739 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN2P57739 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 AC005052.1-201ENST00000625181 2492 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN2P57739 AC079328.2-201ENST00000561241 3354 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 KRT8P12-202ENST00000472924 1397 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 AC063926.2-201ENST00000623766 1308 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDN2P57739 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN2P57739 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN2P57739 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN2P57739 AL132655.2-201ENST00000596276 594 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLDN2P57739 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 AC011676.5-201ENST00000624864 2660 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 NKILA-202ENST00000614771 2598 ntBASIC16.05■□□□□ 0.16
CLDN2P57739 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN2P57739 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN2P57739 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN2P57739 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN2P57739 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 AL139010.1-201ENST00000454878 894 ntBASIC16.04■□□□□ 0.16
CLDN2P57739 SPDYE18-201ENST00000510091 1050 ntBASIC16.04■□□□□ 0.16
CLDN2P57739 AC027307.3-201ENST00000594262 1100 ntBASIC16.04■□□□□ 0.16
CLDN2P57739 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 AC004790.1-201ENST00000612686 536 ntBASIC16.04■□□□□ 0.16
CLDN2P57739 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
CLDN2P57739 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLDN2P57739 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN2P57739 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN2P57739 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN2P57739 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN2P57739 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN2P57739 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLDN2P57739 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN2P57739 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN2P57739 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms