Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.75□□□□□ -0.05
SUMO3P55854 FAM58DP-201ENST00000428076 619 ntBASIC14.75□□□□□ -0.05
SUMO3P55854 DNAJB3-202ENST00000449667 1266 ntBASIC14.75□□□□□ -0.05
SUMO3P55854 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.75□□□□□ -0.05
SUMO3P55854 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.75□□□□□ -0.05
SUMO3P55854 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 AL691403.2-201ENST00000618460 490 ntBASIC14.75□□□□□ -0.05
SUMO3P55854 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SUMO3P55854 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SUMO3P55854 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 SPDYE7P-202ENST00000420373 878 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 AL353705.2-201ENST00000428243 662 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 GPS2P2-201ENST00000430745 888 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.74□□□□□ -0.05
SUMO3P55854 RBPMS2P1-201ENST00000437762 623 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.74□□□□□ -0.05
SUMO3P55854 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.74□□□□□ -0.05
SUMO3P55854 AC243562.2-201ENST00000561247 970 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.74□□□□□ -0.05
SUMO3P55854 AP001059.3-201ENST00000619053 235 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.74□□□□□ -0.05
SUMO3P55854 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 AL391005.1-201ENST00000623953 2435 ntBASIC14.74□□□□□ -0.05
SUMO3P55854 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SUMO3P55854 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
SUMO3P55854 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC008677.1-201ENST00000519230 1561 ntBASIC14.73□□□□□ -0.05
SUMO3P55854 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms