Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC006449.6-201ENST00000612330 2296 ntBASIC14.28□□□□□ -0.12
FOXG1P55316 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXG1P55316 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.28□□□□□ -0.12
FOXG1P55316 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.28□□□□□ -0.12
FOXG1P55316 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.28□□□□□ -0.12
FOXG1P55316 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXG1P55316 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.28□□□□□ -0.12
FOXG1P55316 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXG1P55316 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
FOXG1P55316 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.27□□□□□ -0.12
FOXG1P55316 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.27□□□□□ -0.12
FOXG1P55316 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FOXG1P55316 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FOXG1P55316 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXG1P55316 FO538757.1-201ENST00000623083 1397 ntBASIC14.27□□□□□ -0.12
FOXG1P55316 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXG1P55316 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXG1P55316 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXG1P55316 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXG1P55316 MIR4321-201ENST00000592276 80 ntBASIC14.27□□□□□ -0.13
FOXG1P55316 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.27□□□□□ -0.13
FOXG1P55316 AC007967.4-201ENST00000614700 386 ntBASIC14.27□□□□□ -0.13
FOXG1P55316 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXG1P55316 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
FOXG1P55316 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FOXG1P55316 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXG1P55316 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
FOXG1P55316 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXG1P55316 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXG1P55316 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
FOXG1P55316 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXG1P55316 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
FOXG1P55316 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXG1P55316 MIR943-201ENST00000401286 94 ntBASIC14.26□□□□□ -0.13
FOXG1P55316 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 AC107890.1-201ENST00000422478 521 ntBASIC14.26□□□□□ -0.13
FOXG1P55316 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 HMGN1P19-201ENST00000436976 333 ntBASIC14.26□□□□□ -0.13
FOXG1P55316 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 MTND6P24-201ENST00000440466 518 ntBASIC14.26□□□□□ -0.13
FOXG1P55316 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXG1P55316 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXG1P55316 AC024267.1-201ENST00000582320 895 ntBASIC14.26□□□□□ -0.13
FOXG1P55316 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXG1P55316 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXG1P55316 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXG1P55316 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FOXG1P55316 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXG1P55316 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms