Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHA4P54764 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHA4P54764 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHA4P54764 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHA4P54764 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.68■□□□□ 0.1
EPHA4P54764 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 BTBD7P1-201ENST00000447253 1453 ntBASIC15.68■□□□□ 0.1
EPHA4P54764 KRT8P12-202ENST00000472924 1397 ntBASIC15.68■□□□□ 0.1
EPHA4P54764 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.68■□□□□ 0.1
EPHA4P54764 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.68■□□□□ 0.1
EPHA4P54764 RN7SL618P-201ENST00000477850 296 ntBASIC15.68■□□□□ 0.1
EPHA4P54764 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.68■□□□□ 0.1
EPHA4P54764 SERBP1P5-201ENST00000510079 1181 ntBASIC15.68■□□□□ 0.1
EPHA4P54764 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHA4P54764 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.68■□□□□ 0.1
EPHA4P54764 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHA4P54764 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
EPHA4P54764 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
EPHA4P54764 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHA4P54764 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
EPHA4P54764 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
EPHA4P54764 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHA4P54764 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.67■□□□□ 0.1
EPHA4P54764 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.67■□□□□ 0.1
EPHA4P54764 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.67■□□□□ 0.1
EPHA4P54764 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.67■□□□□ 0.1
EPHA4P54764 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.67■□□□□ 0.1
EPHA4P54764 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EPHA4P54764 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EPHA4P54764 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
EPHA4P54764 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHA4P54764 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
EPHA4P54764 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms