Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RAD23BP54727 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 AC142381.1-201ENST00000426099 345 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.47■□□□□ 0.39
RAD23BP54727 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RAD23BP54727 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.47■□□□□ 0.39
RAD23BP54727 AP000344.2-201ENST00000512987 629 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 AC105233.2-201ENST00000523697 349 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 AF228730.5-201ENST00000530288 346 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 AP000842.3-202ENST00000569238 1080 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RAD23BP54727 AC084121.4-201ENST00000641598 221 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 AF228730.8-201ENST00000642140 221 ntBASIC17.47■□□□□ 0.39
RAD23BP54727 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.47■□□□□ 0.39
RAD23BP54727 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAD23BP54727 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.47■□□□□ 0.39
RAD23BP54727 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAD23BP54727 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.46■□□□□ 0.39
RAD23BP54727 AC254562.1-201ENST00000417586 456 ntBASIC17.46■□□□□ 0.39
RAD23BP54727 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.46■□□□□ 0.39
RAD23BP54727 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.46■□□□□ 0.39
RAD23BP54727 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.46■□□□□ 0.39
RAD23BP54727 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAD23BP54727 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.46■□□□□ 0.39
RAD23BP54727 KRT8P23-201ENST00000560090 1207 ntBASIC17.46■□□□□ 0.39
RAD23BP54727 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.46■□□□□ 0.39
RAD23BP54727 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.46■□□□□ 0.39
RAD23BP54727 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.46■□□□□ 0.39
RAD23BP54727 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.46■□□□□ 0.39
RAD23BP54727 AC139530.3-201ENST00000620344 690 ntBASIC17.46■□□□□ 0.39
RAD23BP54727 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.46■□□□□ 0.39
RAD23BP54727 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 AL589702.1-201ENST00000641229 1509 ntBASIC17.46■□□□□ 0.39
RAD23BP54727 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAD23BP54727 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RAD23BP54727 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAD23BP54727 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAD23BP54727 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAD23BP54727 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RAD23BP54727 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms