Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CSF2RBP1-201ENST00000447905 391 ntBASIC19.97■□□□□ 0.79
NUP98P52948 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.97■□□□□ 0.79
NUP98P52948 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.97■□□□□ 0.79
NUP98P52948 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP98P52948 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP98P52948 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.97■□□□□ 0.79
NUP98P52948 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP98P52948 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.97■□□□□ 0.79
NUP98P52948 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.97■□□□□ 0.79
NUP98P52948 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.97■□□□□ 0.79
NUP98P52948 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP98P52948 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NUP98P52948 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP98P52948 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP98P52948 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NUP98P52948 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 AC106886.4-201ENST00000623557 2502 ntBASIC19.96■□□□□ 0.79
NUP98P52948 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP98P52948 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.96■□□□□ 0.79
NUP98P52948 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
NUP98P52948 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.96■□□□□ 0.79
NUP98P52948 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 AL359711.2-201ENST00000563105 872 ntBASIC19.96■□□□□ 0.79
NUP98P52948 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.96■□□□□ 0.79
NUP98P52948 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 AC244669.2-201ENST00000612320 853 ntBASIC19.96■□□□□ 0.79
NUP98P52948 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP98P52948 AGGF1P2-201ENST00000426656 2106 ntBASIC19.96■□□□□ 0.79
NUP98P52948 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NUP98P52948 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP98P52948 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP98P52948 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.95■□□□□ 0.78
NUP98P52948 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NUP98P52948 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP98P52948 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NUP98P52948 AC000095.1-201ENST00000603208 874 ntBASIC19.95■□□□□ 0.78
NUP98P52948 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
NUP98P52948 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.95■□□□□ 0.78
NUP98P52948 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP98P52948 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 HAUS4P1-201ENST00000406739 1145 ntBASIC19.95■□□□□ 0.78
NUP98P52948 AC134915.1-201ENST00000426461 574 ntBASIC19.95■□□□□ 0.78
NUP98P52948 AL355994.2-201ENST00000447882 704 ntBASIC19.95■□□□□ 0.78
NUP98P52948 CTBP2P5-201ENST00000454986 1264 ntBASIC19.95■□□□□ 0.78
NUP98P52948 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 TDH-203ENST00000531764 1110 ntBASIC19.95■□□□□ 0.78
NUP98P52948 PTP4A1P2-201ENST00000546033 454 ntBASIC19.95■□□□□ 0.78
NUP98P52948 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 AC133552.6-201ENST00000613406 534 ntBASIC19.95■□□□□ 0.78
NUP98P52948 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP98P52948 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NUP98P52948 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 REXO1L1P-202ENST00000608646 1974 ntBASIC19.94■□□□□ 0.78
NUP98P52948 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.94■□□□□ 0.78
NUP98P52948 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.94■□□□□ 0.78
NUP98P52948 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.94■□□□□ 0.78
NUP98P52948 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.94■□□□□ 0.78
NUP98P52948 AC012313.1-201ENST00000593393 3059 ntBASIC19.94■□□□□ 0.78
NUP98P52948 AC006449.6-201ENST00000612330 2296 ntBASIC19.94■□□□□ 0.78
NUP98P52948 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms