Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 NFIC-211ENST00000641145 8399 ntBASIC17.69■□□□□ 0.42
PDE6CP51160 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 AC004835.2-201ENST00000603762 682 ntBASIC17.68■□□□□ 0.42
PDE6CP51160 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PDE6CP51160 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PDE6CP51160 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 AC006449.6-201ENST00000612330 2296 ntBASIC17.68■□□□□ 0.42
PDE6CP51160 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDE6CP51160 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6CP51160 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
PDE6CP51160 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.67■□□□□ 0.42
PDE6CP51160 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.67■□□□□ 0.42
PDE6CP51160 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.67■□□□□ 0.42
PDE6CP51160 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6CP51160 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6CP51160 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6CP51160 AL513477.1-201ENST00000602865 2407 ntBASIC17.67■□□□□ 0.42
PDE6CP51160 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDE6CP51160 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6CP51160 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms