Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 AP3S2-216ENST00000617003 1561 ntBASIC16.42■□□□□ 0.22
CTPS1P17812 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 U82695.1-201ENST00000635752 1889 ntBASIC16.42■□□□□ 0.22
CTPS1P17812 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS1P17812 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 AC006449.5-201ENST00000610658 2098 ntBASIC16.41■□□□□ 0.22
CTPS1P17812 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS1P17812 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS1P17812 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.41■□□□□ 0.22
CTPS1P17812 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTPS1P17812 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 AC026150.2-201ENST00000564693 1156 ntBASIC16.41■□□□□ 0.22
CTPS1P17812 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS1P17812 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS1P17812 AC093028.1-201ENST00000622998 982 ntBASIC16.41■□□□□ 0.22
CTPS1P17812 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTPS1P17812 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CTPS1P17812 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CTPS1P17812 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS1P17812 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.4■□□□□ 0.22
CTPS1P17812 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.4■□□□□ 0.22
CTPS1P17812 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 SPDYE14P-201ENST00000442619 822 ntBASIC16.4■□□□□ 0.22
CTPS1P17812 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.4■□□□□ 0.22
CTPS1P17812 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.4■□□□□ 0.22
CTPS1P17812 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS1P17812 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS1P17812 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTPS1P17812 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CTPS1P17812 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTPS1P17812 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
CTPS1P17812 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.39■□□□□ 0.21
CTPS1P17812 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.39■□□□□ 0.21
CTPS1P17812 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CTPS1P17812 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
CTPS1P17812 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.39■□□□□ 0.21
CTPS1P17812 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CTPS1P17812 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.39■□□□□ 0.21
CTPS1P17812 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.39■□□□□ 0.21
CTPS1P17812 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.39■□□□□ 0.21
CTPS1P17812 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTPS1P17812 HLA-J-203ENST00000494367 1087 ntBASIC16.39■□□□□ 0.21
CTPS1P17812 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTPS1P17812 RARRES2P9-201ENST00000565168 469 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms