Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBCP0CG48 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.38□□□□□ -0.11
UBCP0CG48 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 AC012569.1-201ENST00000591191 1524 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 AKR1C7P-201ENST00000305623 895 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 AC073621.1-201ENST00000392730 636 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 PGM5P2-202ENST00000637225 1043 ntBASIC14.38□□□□□ -0.11
UBCP0CG48 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
UBCP0CG48 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
UBCP0CG48 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.38□□□□□ -0.11
UBCP0CG48 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.38□□□□□ -0.11
UBCP0CG48 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBCP0CG48 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 AL592424.1-201ENST00000563624 1536 ntBASIC14.37□□□□□ -0.11
UBCP0CG48 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.37□□□□□ -0.11
UBCP0CG48 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.37□□□□□ -0.11
UBCP0CG48 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.37□□□□□ -0.11
UBCP0CG48 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms