Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
H2AFB1P0C5Y9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.24□□□□□ -0.29
H2AFB1P0C5Y9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2AFB1P0C5Y9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 AC099521.3-201ENST00000624251 2938 ntBASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 AC136621.1-201ENST00000624017 2304 ntBASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2AFB1P0C5Y9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 KRT18P48-201ENST00000434763 852 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 AC068472.1-201ENST00000474589 881 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 STK25P1-201ENST00000585406 838 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 REXO1L10P-201ENST00000615707 1290 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 REXO1L12P-201ENST00000622156 912 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 AC010653.2-201ENST00000623505 997 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 AC118758.2-201ENST00000614242 2813 ntBASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2AFB1P0C5Y9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms