Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H2ABP04908 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H2ABP04908 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H2ABP04908 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.97□□□□□ -0.01
HIST1H2ABP04908 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HIST1H2ABP04908 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 VN2R19P-201ENST00000442399 1052 ntBASIC14.96□□□□□ -0.01
HIST1H2ABP04908 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 AL031432.2-201ENST00000566714 459 ntBASIC14.96□□□□□ -0.01
HIST1H2ABP04908 AL928711.1-201ENST00000570165 459 ntBASIC14.96□□□□□ -0.01
HIST1H2ABP04908 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H2ABP04908 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H2ABP04908 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H2ABP04908 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
HIST1H2ABP04908 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 TSPY26P-202ENST00000565928 3884 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 OR7E47P-204ENST00000575924 449 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 AC104692.2-201ENST00000603054 253 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ACTL9-202ENST00000612068 1252 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 AC022188.1-201ENST00000620960 1664 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 AC007950.2-201ENST00000615045 2347 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 HYMAI-201ENST00000635591 3347 ntBASIC14.95□□□□□ -0.02
HIST1H2ABP04908 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H2ABP04908 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms