Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.13■□□□□ 0.33
ERBB2P04626 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
ERBB2P04626 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 AL627223.1-201ENST00000416693 442 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.13■□□□□ 0.33
ERBB2P04626 AC005237.2-201ENST00000434368 219 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 AP000344.2-201ENST00000512987 629 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 AC061975.2-201ENST00000581722 295 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.13■□□□□ 0.33
ERBB2P04626 MIR4321-201ENST00000592276 80 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.13■□□□□ 0.33
ERBB2P04626 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.13■□□□□ 0.33
ERBB2P04626 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERBB2P04626 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ERBB2P04626 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 MIR648-201ENST00000385046 94 ntBASIC17.12■□□□□ 0.33
ERBB2P04626 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.12■□□□□ 0.33
ERBB2P04626 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.12■□□□□ 0.33
ERBB2P04626 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
ERBB2P04626 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.12■□□□□ 0.33
ERBB2P04626 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.12■□□□□ 0.33
ERBB2P04626 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
ERBB2P04626 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERBB2P04626 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 CDC14C-201ENST00000428251 1719 ntBASIC17.11■□□□□ 0.33
ERBB2P04626 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.11■□□□□ 0.33
ERBB2P04626 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 MIR1233-2-201ENST00000408138 82 ntBASIC17.11■□□□□ 0.33
ERBB2P04626 MIR1233-1-201ENST00000408722 82 ntBASIC17.11■□□□□ 0.33
ERBB2P04626 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 AP006288.1-201ENST00000446065 395 ntBASIC17.11■□□□□ 0.33
ERBB2P04626 AC004967.1-201ENST00000453589 447 ntBASIC17.11■□□□□ 0.33
ERBB2P04626 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ERBB2P04626 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.11■□□□□ 0.33
ERBB2P04626 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
ERBB2P04626 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERBB2P04626 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms