Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 GPS2P2-201ENST00000430745 888 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 RNA5SP410-201ENST00000516285 106 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 SNHG9-202ENST00000564014 471 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 AC061975.2-201ENST00000581722 295 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AC027612.4-201ENST00000605371 583 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 AC139530.3-201ENST00000620344 690 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.4
HLA-DRAP01903 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 HLA-H-201ENST00000383620 1096 ntBASIC17.52■□□□□ 0.4
HLA-DRAP01903 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC023141.5-201ENST00000458585 616 ntBASIC17.52■□□□□ 0.4
HLA-DRAP01903 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 AC009093.7-201ENST00000623853 1223 ntBASIC17.52■□□□□ 0.4
HLA-DRAP01903 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRAP01903 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRAP01903 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRAP01903 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HLA-DRAP01903 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRAP01903 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HLA-DRAP01903 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRAP01903 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
HLA-DRAP01903 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRAP01903 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRAP01903 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 PCDHA1-201ENST00000378133 2726 ntBASIC17.51■□□□□ 0.39
HLA-DRAP01903 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRAP01903 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DRAP01903 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms