Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP3BO95985 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TOP3BO95985 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 AL627223.1-201ENST00000416693 442 ntBASIC16.78■□□□□ 0.28
TOP3BO95985 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP3BO95985 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP3BO95985 AL359881.2-201ENST00000602973 570 ntBASIC16.78■□□□□ 0.28
TOP3BO95985 AC068137.2-201ENST00000605408 478 ntBASIC16.78■□□□□ 0.28
TOP3BO95985 AC008761.3-201ENST00000624803 892 ntBASIC16.78■□□□□ 0.28
TOP3BO95985 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP3BO95985 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP3BO95985 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
TOP3BO95985 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP3BO95985 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP3BO95985 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.77■□□□□ 0.28
TOP3BO95985 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 AC006538.1-201ENST00000567905 1585 ntBASIC16.77■□□□□ 0.28
TOP3BO95985 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 AC011270.2-201ENST00000624293 2550 ntBASIC16.77■□□□□ 0.28
TOP3BO95985 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP3BO95985 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.77■□□□□ 0.28
TOP3BO95985 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP3BO95985 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP3BO95985 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
TOP3BO95985 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP3BO95985 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TOP3BO95985 AC009093.7-201ENST00000623853 1223 ntBASIC16.77■□□□□ 0.28
TOP3BO95985 AL805961.1-202ENST00000641562 540 ntBASIC16.77■□□□□ 0.28
TOP3BO95985 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.77■□□□□ 0.27
TOP3BO95985 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.77■□□□□ 0.27
TOP3BO95985 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TOP3BO95985 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TOP3BO95985 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.77■□□□□ 0.27
TOP3BO95985 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP3BO95985 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP3BO95985 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.77■□□□□ 0.27
TOP3BO95985 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.77■□□□□ 0.27
TOP3BO95985 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP3BO95985 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TOP3BO95985 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 AL671710.1-201ENST00000610245 2349 ntBASIC16.76■□□□□ 0.27
TOP3BO95985 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 AL365203.3-201ENST00000609742 2057 ntBASIC16.76■□□□□ 0.27
TOP3BO95985 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TOP3BO95985 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 AC022188.1-201ENST00000620960 1664 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms