Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS3O75489 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFS3O75489 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 AL022342.1-201ENST00000400363 863 ntBASIC16.31■□□□□ 0.2
NDUFS3O75489 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDUFS3O75489 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 KRT18P58-201ENST00000527480 1120 ntBASIC16.31■□□□□ 0.2
NDUFS3O75489 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.31■□□□□ 0.2
NDUFS3O75489 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS3O75489 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NDUFS3O75489 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS3O75489 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFS3O75489 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
NDUFS3O75489 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS3O75489 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS3O75489 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NDUFS3O75489 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFS3O75489 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFS3O75489 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 AC093724.1-201ENST00000448659 1027 ntBASIC16.3■□□□□ 0.2
NDUFS3O75489 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.3■□□□□ 0.2
NDUFS3O75489 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFS3O75489 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS3O75489 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFS3O75489 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS3O75489 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFS3O75489 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NDUFS3O75489 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NDUFS3O75489 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NDUFS3O75489 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NDUFS3O75489 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 AC040169.1-201ENST00000565382 521 ntBASIC16.29■□□□□ 0.2
NDUFS3O75489 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.29■□□□□ 0.2
NDUFS3O75489 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.29■□□□□ 0.2
NDUFS3O75489 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDUFS3O75489 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS3O75489 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFS3O75489 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms