Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC007064.4-201ENST00000637740 555 ntBASIC16.44■□□□□ 0.22
GPC4O75487 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.44■□□□□ 0.22
GPC4O75487 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.44■□□□□ 0.22
GPC4O75487 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
GPC4O75487 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
GPC4O75487 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 MED15P5-201ENST00000423150 992 ntBASIC16.43■□□□□ 0.22
GPC4O75487 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 AC018845.2-201ENST00000568326 409 ntBASIC16.43■□□□□ 0.22
GPC4O75487 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
GPC4O75487 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 AC004877.2-201ENST00000623941 599 ntBASIC16.43■□□□□ 0.22
GPC4O75487 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.43■□□□□ 0.22
GPC4O75487 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GPC4O75487 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GPC4O75487 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.42■□□□□ 0.22
GPC4O75487 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 RNA5SP416-201ENST00000516838 111 ntBASIC16.42■□□□□ 0.22
GPC4O75487 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 AL671883.3-201ENST00000603274 991 ntBASIC16.42■□□□□ 0.22
GPC4O75487 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.42■□□□□ 0.22
GPC4O75487 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.42■□□□□ 0.22
GPC4O75487 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 AL512652.2-201ENST00000625156 1716 ntBASIC16.42■□□□□ 0.22
GPC4O75487 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GPC4O75487 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms