Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF40O75150 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF40O75150 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF40O75150 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF40O75150 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
RNF40O75150 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF40O75150 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RNF40O75150 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.71■□□□□ 0.42
RNF40O75150 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNF40O75150 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF40O75150 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 AC096734.2-201ENST00000562054 433 ntBASIC17.7■□□□□ 0.42
RNF40O75150 AP002472.1-201ENST00000577490 586 ntBASIC17.7■□□□□ 0.42
RNF40O75150 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF40O75150 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF40O75150 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF40O75150 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 AC009336.1-201ENST00000608941 1553 ntBASIC17.7■□□□□ 0.42
RNF40O75150 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF40O75150 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 AP002414.1-201ENST00000391405 1147 ntBASIC17.69■□□□□ 0.42
RNF40O75150 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF40O75150 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF40O75150 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 KRT19P2-202ENST00000557173 1012 ntBASIC17.69■□□□□ 0.42
RNF40O75150 AL031432.2-201ENST00000566714 459 ntBASIC17.69■□□□□ 0.42
RNF40O75150 AL928711.1-201ENST00000570165 459 ntBASIC17.69■□□□□ 0.42
RNF40O75150 RN7SL602P-201ENST00000578326 324 ntBASIC17.69■□□□□ 0.42
RNF40O75150 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 AL353135.1-201ENST00000606729 504 ntBASIC17.69■□□□□ 0.42
RNF40O75150 GGTLC5P-201ENST00000617623 998 ntBASIC17.69■□□□□ 0.42
RNF40O75150 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF40O75150 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF40O75150 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF40O75150 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF40O75150 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF40O75150 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF40O75150 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF40O75150 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF40O75150 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF40O75150 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms