Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.5■□□□□ 0.23
KDELR3O43731 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.5■□□□□ 0.23
KDELR3O43731 AC107890.1-201ENST00000422478 521 ntBASIC16.5■□□□□ 0.23
KDELR3O43731 AL139010.1-201ENST00000454878 894 ntBASIC16.5■□□□□ 0.23
KDELR3O43731 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.5■□□□□ 0.23
KDELR3O43731 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.5■□□□□ 0.23
KDELR3O43731 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 AL133215.2-201ENST00000609242 977 ntBASIC16.5■□□□□ 0.23
KDELR3O43731 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KDELR3O43731 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.5■□□□□ 0.23
KDELR3O43731 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KDELR3O43731 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.5■□□□□ 0.23
KDELR3O43731 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
KDELR3O43731 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.5■□□□□ 0.23
KDELR3O43731 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.5■□□□□ 0.23
KDELR3O43731 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
KDELR3O43731 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.5■□□□□ 0.23
KDELR3O43731 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KDELR3O43731 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDELR3O43731 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.5■□□□□ 0.23
KDELR3O43731 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 MIR648-201ENST00000385046 94 ntBASIC16.49■□□□□ 0.23
KDELR3O43731 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KDELR3O43731 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 HAUS4P1-201ENST00000406739 1145 ntBASIC16.49■□□□□ 0.23
KDELR3O43731 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.49■□□□□ 0.23
KDELR3O43731 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.49■□□□□ 0.23
KDELR3O43731 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 DUX4L27-201ENST00000554796 1261 ntBASIC16.49■□□□□ 0.23
KDELR3O43731 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 AC093512.1-201ENST00000617969 520 ntBASIC16.49■□□□□ 0.23
KDELR3O43731 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.49■□□□□ 0.23
KDELR3O43731 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
KDELR3O43731 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.49■□□□□ 0.23
KDELR3O43731 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDELR3O43731 PCDH8P1-201ENST00000428983 2773 ntBASIC16.49■□□□□ 0.23
KDELR3O43731 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KDELR3O43731 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.48■□□□□ 0.23
KDELR3O43731 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.48■□□□□ 0.23
KDELR3O43731 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
KDELR3O43731 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
KDELR3O43731 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 AL691432.1-201ENST00000596308 1422 ntBASIC16.48■□□□□ 0.23
KDELR3O43731 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDELR3O43731 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
KDELR3O43731 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.48■□□□□ 0.23
KDELR3O43731 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 MTND6P24-201ENST00000440466 518 ntBASIC16.48■□□□□ 0.23
KDELR3O43731 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDELR3O43731 CYMP-203ENST00000474680 1263 ntBASIC16.48■□□□□ 0.23
KDELR3O43731 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.48■□□□□ 0.23
KDELR3O43731 AC069120.2-201ENST00000524091 540 ntBASIC16.48■□□□□ 0.23
KDELR3O43731 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms