Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RIPK2O43353 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.62■□□□□ 0.25
RIPK2O43353 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.62■□□□□ 0.25
RIPK2O43353 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.62■□□□□ 0.25
RIPK2O43353 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.62■□□□□ 0.25
RIPK2O43353 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.62■□□□□ 0.25
RIPK2O43353 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 NPAP1P7-201ENST00000613027 823 ntBASIC16.62■□□□□ 0.25
RIPK2O43353 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.62■□□□□ 0.25
RIPK2O43353 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RIPK2O43353 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RIPK2O43353 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.61■□□□□ 0.25
RIPK2O43353 AC087481.3-201ENST00000602886 1894 ntBASIC16.61■□□□□ 0.25
RIPK2O43353 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 AC006504.4-201ENST00000592118 1568 ntBASIC16.61■□□□□ 0.25
RIPK2O43353 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.61■□□□□ 0.25
RIPK2O43353 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.61■□□□□ 0.25
RIPK2O43353 AL160237.2-201ENST00000556165 472 ntBASIC16.61■□□□□ 0.25
RIPK2O43353 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.61■□□□□ 0.25
RIPK2O43353 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RIPK2O43353 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RIPK2O43353 IER3-202ENST00000376377 1350 ntBASIC16.61■□□□□ 0.25
RIPK2O43353 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.61■□□□□ 0.25
RIPK2O43353 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.61■□□□□ 0.25
RIPK2O43353 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RIPK2O43353 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 ELK2BP-201ENST00000415014 1224 ntBASIC16.6■□□□□ 0.25
RIPK2O43353 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 AC138894.3-201ENST00000603787 634 ntBASIC16.6■□□□□ 0.25
RIPK2O43353 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.6■□□□□ 0.25
RIPK2O43353 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.6■□□□□ 0.25
RIPK2O43353 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms