Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB4C9JG80 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SPCS2P4-201ENST00000436160 681 ntBASIC14.4□□□□□ -0.1
NPIPB4C9JG80 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AC079140.1-201ENST00000508039 487 ntBASIC14.4□□□□□ -0.1
NPIPB4C9JG80 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPB4C9JG80 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
NPIPB4C9JG80 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms