Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AC092171.3-201ENST00000610122 2651 ntBASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AL671710.1-201ENST00000610245 2349 ntBASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AL512652.2-201ENST00000625156 1716 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AC126177.1-201ENST00000547829 2218 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 RHOQP3-201ENST00000437982 621 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 MIR3909-201ENST00000579518 119 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AC023141.13-201ENST00000604991 943 ntBASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DRB4X5D2U9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 NORAD-201ENST00000565493 5339 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 GGT3P-204ENST00000453783 1664 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 RNU1-129P-201ENST00000384064 167 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AL591424.1-201ENST00000442569 1213 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 U1.21-201ENST00000580816 167 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms