Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AL596325.1-201ENST00000563991 1082 ntBASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AC008738.7-201ENST00000609744 511 ntBASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 AL353779.1-201ENST00000434793 351 ntBASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1G3Q9Y6M4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CSNK1G3Q9Y6M4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 AC106886.4-201ENST00000623557 2502 ntBASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 NME2P1-201ENST00000426182 414 ntBASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 SERBP1P3-201ENST00000459980 809 ntBASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 AC061975.2-201ENST00000581722 295 ntBASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1G3Q9Y6M4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms