Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
AP4B1Q9Y6B7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 NKAPP1-205ENST00000585790 367 ntBASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP4B1Q9Y6B7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP4B1Q9Y6B7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PRAL-201ENST00000624952 3286 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 RPS2P28-201ENST00000314255 741 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 KRT18P67-201ENST00000432816 1264 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 RNPS1P1-201ENST00000507437 918 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SART3-203ENST00000546611 1184 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 TP73-AS1-207ENST00000624167 988 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AL022326.1-202ENST00000641533 845 ntBASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4B1Q9Y6B7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 AC009336.1-201ENST00000608941 1553 ntBASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms