Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 CEND1P1-201ENST00000451006 455 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 ALG1L5P-201ENST00000482043 771 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC243562.1-201ENST00000560672 389 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AL138918.1-201ENST00000568306 659 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC027307.2-201ENST00000591252 911 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBQLN4Q9NRR5 AC026691.1-201ENST00000602502 2017 ntBASIC15.04■□□□□ -0
UBQLN4Q9NRR5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 TIMM8BP1-201ENST00000452384 211 ntBASIC15.03■□□□□ -0
UBQLN4Q9NRR5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC098859.1-201ENST00000502915 1238 ntBASIC15.03■□□□□ -0
UBQLN4Q9NRR5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC079140.1-201ENST00000508039 487 ntBASIC15.03■□□□□ -0
UBQLN4Q9NRR5 IGHV3-62-201ENST00000520057 340 ntBASIC15.03■□□□□ -0
UBQLN4Q9NRR5 KRT8P23-201ENST00000560090 1207 ntBASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN4Q9NRR5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms