Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AL512356.2-201ENST00000546955 174 ntBASIC17.29■□□□□ 0.36
CYLDQ9NQC7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AL138918.1-201ENST00000568306 659 ntBASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 UXT-AS1-201ENST00000590504 1525 ntBASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 AC022188.1-201ENST00000620960 1664 ntBASIC17.29■□□□□ 0.36
CYLDQ9NQC7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 CYMP-203ENST00000474680 1263 ntBASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 SLC25A39P2-201ENST00000537614 270 ntBASIC17.28■□□□□ 0.36
CYLDQ9NQC7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AC004449.1-201ENST00000564240 433 ntBASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 AP001059.3-201ENST00000619053 235 ntBASIC17.28■□□□□ 0.36
CYLDQ9NQC7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYLDQ9NQC7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 AC142381.1-201ENST00000426099 345 ntBASIC17.27■□□□□ 0.36
CYLDQ9NQC7 AC098859.1-201ENST00000502915 1238 ntBASIC17.27■□□□□ 0.36
CYLDQ9NQC7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 AL365330.1-201ENST00000607459 531 ntBASIC17.27■□□□□ 0.36
CYLDQ9NQC7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.27■□□□□ 0.36
CYLDQ9NQC7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CYLDQ9NQC7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms