Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 AP006288.1-201ENST00000446065 395 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SPDYE11-202ENST00000450699 704 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 KRT18P34-201ENST00000488218 1270 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 AL135744.1-201ENST00000565098 629 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SPDYE9P-201ENST00000570642 692 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SPDYE10P-202ENST00000612005 668 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SPDYE8P-202ENST00000612377 668 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 AL691403.2-201ENST00000618460 490 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14□□□□□ -0.17
GCM1Q9NP62 AC092171.3-201ENST00000610122 2651 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14□□□□□ -0.17
GCM1Q9NP62 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 TIMM8BP1-201ENST00000452384 211 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14□□□□□ -0.17
GCM1Q9NP62 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14□□□□□ -0.17
GCM1Q9NP62 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14□□□□□ -0.17
GCM1Q9NP62 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 AC020765.3-201ENST00000613051 740 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 AC105339.1-204ENST00000636249 355 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 AC079781.4-201ENST00000641908 219 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14□□□□□ -0.17
GCM1Q9NP62 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14□□□□□ -0.17
GCM1Q9NP62 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14□□□□□ -0.17
GCM1Q9NP62 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14□□□□□ -0.17
GCM1Q9NP62 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14□□□□□ -0.17
GCM1Q9NP62 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GCM1Q9NP62 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms