Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL158212.4-201ENST00000624062 1286 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 RPL13AP19-201ENST00000434320 584 ntBASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 RN7SL720P-201ENST00000488178 304 ntBASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 AC098859.1-201ENST00000502915 1238 ntBASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CSMD1Q96PZ7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 AL442647.2-201ENST00000429864 857 ntBASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 AC018635.2-201ENST00000608625 364 ntBASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 MIR6756-201ENST00000616240 63 ntBASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSMD1Q96PZ7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TIMM17BP1-201ENST00000545713 516 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 FNTAP2-201ENST00000430308 634 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 AC005052.1-201ENST00000625181 2492 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 NOC2LP2-201ENST00000407594 1944 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 RARRES2P5-201ENST00000564013 466 ntBASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSMD1Q96PZ7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 HYMAI-201ENST00000635591 3347 ntBASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSMD1Q96PZ7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms