Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 ELK2BP-201ENST00000415014 1224 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 KRT18P67-201ENST00000432816 1264 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AC018712.1-201ENST00000455767 687 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TERC-201ENST00000602385 541 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AL031008.1-201ENST00000619963 541 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AC006504.4-201ENST00000592118 1568 ntBASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.83□□□□□ -0.2
RTN4IP1Q8WWV3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 RPS2P28-201ENST00000314255 741 ntBASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTN4IP1Q8WWV3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms